| Lecture | Title | HTML | Rmd | |
|---|---|---|---|---|
| Lecture 0 | An introduction to BIOF 439 | HTML | Rmd | |
| Lecture 1 | ||||
| Lecture 2 | Starting DataViz using R: ggplot2 | HTML | Rmd | |
| Lecture 3 | A quick tour of R | HTML | Rmd | |
| Lecture 5 | A sampling of bioinformatics using R | HTML | Rmd | |
| Lecture 6 | Putting it together | HTML | Rmd | |
| Lecture 7 | Final comments | HTML | Rmd |
In this lecture, we’ll start a discussion about data visualization. We will also start using R and R Markdown on RStudio Cloud. We will work on a template notebook that I’ve shared with you on RStudio Cloud, and you can expand on that during class and as we move through the course.
In this lecture we’ll start learning ggplot2, the concepts of layering and piping, and how to create your own theme
Links to ggplot2 resources.
In this lecture we’ll spend most of our time learning various aspects of R, and then how that can help with graphics.
In this lecture we’ll explore some visualizations commonly used in bioinformatics
Please create a project in RStudio Cloud and share with me. Let me know what the final product is (HTML/PPT/Word), and I’ll figure out how to put it together for the presentations on the last day.